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  5. Sobic.006G024600.1

Sobic.006G024600.1


Description : solute transporter *(AAAP)


Gene families : OG_42_0000219 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G024600.1
Cluster HCAA Clusters: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
At3g09330 No alias Amino acid transporter AVT1G... 0.03 Orthogroups_2024-Update
At5g15240 No alias Amino acid transporter AVT1J... 0.03 Orthogroups_2024-Update
Glyma.10G094000 No alias Transmembrane amino acid transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os04g38660 No alias transmembrane amino acid transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
Solyc03g063050 No alias Amino acid transporter, putative (AHRD V3.3 *** B9SY73_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0051499 D-aminoacyl-tRNA deacylase activity IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 269 648
No external refs found!