At3g60020

Description : SK5 [Source:UniProtKB/TrEMBL;Acc:A0A178VPE2]

Gene families : OG_42_0000356 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At3g60020
Cluster	HCCA clusters: Cluster_239

Target	Alias	Description	ECC score	Gene Family Method
At3g25650	No alias	SKP1-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q1PEL7]	0.06	Orthogroups_2024-Update
At4g34210	No alias	SKP1-like protein 11 [Source:UniProtKB/Swiss-Prot;Acc:O49484]	0.03	Orthogroups_2024-Update
Brara.F00402.1	No alias	ASK-type linker component of SCF E3 ubiquitin ligase complexes	0.03	Orthogroups_2024-Update
Seita.4G186900.1	No alias	ASK-type linker component of SCF E3 ubiquitin ligase complexes	0.02	Orthogroups_2024-Update
Seita.8G115900.1	No alias	ASK-type linker component of SCF E3 ubiquitin ligase complexes	0.02	Orthogroups_2024-Update
Sopen01g053690	No alias	Skp1 family, dimerisation domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008272	sulfate transport	IEP	Predicted GO
MF	GO:0008509	anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015116	sulfate transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015698	inorganic anion transport	IEP	Predicted GO
BP	GO:0072348	sulfur compound transport	IEP	Predicted GO
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR016073	Skp1_comp_POZ	4	63
IPR016072	Skp1_comp_dimer	99	151

External Links

No external refs found!