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  5. Sobic.006G040500.1

Sobic.006G040500.1


Description : P4-type ATPase component *(ALA) of phospholipid flippase complex & active component *(ALA) of ALA-ALIS flippase complex & EC_3.6 hydrolase acting on acid anhydride


Gene families : OG_42_0000190 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G040500.1
Cluster HCAA Clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
A4A49_16115 No alias putative phospholipid-transporting atpase 7 0.02 Orthogroups_2024-Update
Bradi1g63250 No alias aminophospholipid ATPase 1 0.03 Orthogroups_2024-Update
Glyma.08G268900 No alias ATPase E1-E2 type family protein / haloacid... 0.02 Orthogroups_2024-Update
Glyma.09G273900 No alias aminophospholipid ATPase 1 0.02 Orthogroups_2024-Update
LOC_Os06g29380 No alias phospholipid-transporting ATPase, putative, expressed 0.03 Orthogroups_2024-Update
evm.model.tig00000851.10 No alias (at1g59820 : 699.0) Encodes a phospholipid translocase.... 0.02 Orthogroups_2024-Update
evm.model.tig00020830.2 No alias (at1g59820 : 319.0) Encodes a phospholipid translocase.... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
InterPro domains Description Start Stop
IPR032630 P_typ_ATPase_c 786 1025
IPR032631 P-type_ATPase_N 5 69
No external refs found!