Sobic.006G042200.1

Description : metabolite transporter *(DTX)

Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G042200.1
Cluster	HCAA Clusters: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
407976	No alias	MATE efflux family protein	0.02	Orthogroups_2024-Update
Brara.F01030.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Glyma.18G293200	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
MA_10162615g0010	No alias	(at5g52450 : 418.0) MATE efflux family protein;...	0.07	Orthogroups_2024-Update
MA_14711g0010	No alias	(at5g52450 : 528.0) MATE efflux family protein;...	0.02	Orthogroups_2024-Update
PSME_00013683-RA	No alias	(at5g52450 : 524.0) MATE efflux family protein;...	0.03	Orthogroups_2024-Update
Potri.017G120500	No alias	MATE efflux family protein	0.03	Orthogroups_2024-Update
Pp1s48_46V6	No alias	transparent testa 12	0.01	Orthogroups_2024-Update
Seita.1G131200.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Seita.1G131500.1	No alias	metabolite transporter *(DTX)	0.03	Orthogroups_2024-Update
Sopen02g014330	No alias	MatE	0.02	Orthogroups_2024-Update
Sopen04g004900	No alias	MatE	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015291	secondary active transmembrane transporter activity	None	Extended
MF	GO:0015297	antiporter activity	IEA	16Dec
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEA	16Dec
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	16Dec

Type	GO Term	Name	Evidence	Source
MF	GO:0008234	cysteine-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002528	MATE_fam	259	421
IPR002528	MATE_fam	38	198

External Links

No external refs found!