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  5. Sobic.006G052800.1

Sobic.006G052800.1


Description : E1 component of 2-oxoglutarate dehydrogenase complex & EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor


Gene families : OG_42_0002566 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002566_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G052800.1
Cluster HCAA Clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
Brara.I01869.1 No alias E1 component of 2-oxoglutarate dehydrogenase complex &... 0.02 Orthogroups_2024-Update
Cre12.g537200 No alias 2-oxoglutarate dehydrogenase, E1 component 0.02 Orthogroups_2024-Update
Potri.008G051600 No alias 2-oxoglutarate dehydrogenase, E1 component 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005484 SNAP receptor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001017 DH_E1 247 569
IPR005475 Transketolase-like_Pyr-bd 639 854
IPR032106 2-oxogl_dehyd_N 66 104
IPR031717 KGD_C 875 1016
No external refs found!