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  5. Sobic.006G053200.2

Sobic.006G053200.2


Description : iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G053200.2
Cluster HCAA Clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Bradi5g08260 No alias YELLOW STRIPE like 6 0.02 Orthogroups_2024-Update
Brara.J00855.1 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
HORVU6Hr1G061450.4 No alias iron chelator transporter *(YSL) & ferric... 0.03 Orthogroups_2024-Update
Mp4g10660.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Orthogroups_2024-Update
Seita.7G075900.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Seita.7G185100.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Solyc02g081570 No alias Oligopeptide transporter, putative (AHRD V3.3 *** B9SIR4_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0060090 molecular adaptor activity IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070006 metalloaminopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 39 661
No external refs found!