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  5. Sobic.006G054900.1

Sobic.006G054900.1


Description : regulatory mediator of IRE1-bZIP60 UPR pathway


Gene families : OG_42_0000291 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G054900.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Brara.F00589.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.02 Orthogroups_2024-Update
Brara.H02828.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.04 Orthogroups_2024-Update
GRMZM2G046733 No alias Protein of unknown function, DUF538 0.04 Orthogroups_2024-Update
GRMZM2G164781 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Glyma.10G145900 No alias Protein of unknown function, DUF538 0.05 Orthogroups_2024-Update
LOC_Os05g49790 No alias DUF538 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g38240 No alias DUF538 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g37650 No alias DUF538 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.004G056700 No alias Protein of unknown function, DUF538 0.03 Orthogroups_2024-Update
Seita.3G334000.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.04 Orthogroups_2024-Update
Sobic.002G089100.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update
Sobic.010G117100.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.06 Orthogroups_2024-Update
Sobic.010G117600.1 No alias regulatory mediator of IRE1-bZIP60 UPR pathway 0.03 Orthogroups_2024-Update
Sopen00g008360 No alias Protein of unknown function, DUF538 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010167 response to nitrate IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015706 nitrate transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
BP GO:1901698 response to nitrogen compound IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR007493 DUF538 29 141
No external refs found!