Sobic.006G056000.1


Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G056000.1
Cluster HCAA Clusters: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
168175 No alias auxin signaling F-box 2 0.03 Orthogroups_2024-Update
At1g12820 No alias Protein AUXIN SIGNALING F-BOX 3... 0.03 Orthogroups_2024-Update
At3g62980 No alias TIR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA54] 0.03 Orthogroups_2024-Update
Bradi1g67160 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.C02040.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Brara.E00588.1 No alias component *(COI) of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
GRMZM5G848945 No alias auxin signaling F-box 3 0.04 Orthogroups_2024-Update
Glyma.02G254300 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
MA_15842g0010 No alias (at3g62980 : 510.0) Encodes an auxin receptor that... 0.03 Orthogroups_2024-Update
Pp1s90_156V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.3G037200.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.05 Orthogroups_2024-Update
Seita.7G078300.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.04 Orthogroups_2024-Update
Sobic.003G359600.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
Sobic.009G157200.1 No alias component *(COI) of jasmonic acid receptor complex 0.05 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003873 6-phosphofructo-2-kinase activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006000 fructose metabolic process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008408 3'-5' exonuclease activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032780 negative regulation of ATPase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0042030 ATPase inhibitor activity IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
BP GO:0043462 regulation of ATPase activity IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!