1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g096540

Solyc03g096540


Description : PLAT domain-containing protein 1 (AHRD V3.3 *** PLAT1_ARATH)


Gene families : OG_42_0001133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001133_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc03g096540
Cluster HCCA clusters: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
Bradi3g58915 No alias Lipase/lipooxygenase, PLAT/LH2 family protein 0.03 Orthogroups_2024-Update
Brara.D01312.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.05G179300 No alias Lipase/lipooxygenase, PLAT/LH2 family protein 0.03 Orthogroups_2024-Update
Mpzg00240.1 No alias PLAT domain-containing protein 1 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Potri.003G107100 No alias Lipase/lipooxygenase, PLAT/LH2 family protein 0.03 Orthogroups_2024-Update
Sopen03g026660 No alias PLAT/LH2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 36 153
No external refs found!