Sobic.006G082500.1

Description : nucleotide exchange factor *(CGE)

Gene families : OG_42_0003002 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G082500.1
Cluster	HCAA Clusters: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g48540	No alias	Co-chaperone GrpE family protein	0.02	Orthogroups_2024-Update
Glyma.19G120100	No alias	Co-chaperone GrpE family protein	0.04	Orthogroups_2024-Update
LOC_Os02g39870	No alias	co-chaperone GrpE protein, putative, expressed	0.02	Orthogroups_2024-Update
Potri.013G067900	No alias	Co-chaperone GrpE family protein	0.03	Orthogroups_2024-Update
Seita.1G230200.1	No alias	nucleotide exchange factor *(CGE)	0.05	Orthogroups_2024-Update
Sobic.004G212400.2	No alias	nucleotide exchange factor *(CGE)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEA	16Dec
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006457	protein folding	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	16Dec
MF	GO:0046983	protein dimerization activity	None	Extended
MF	GO:0051087	chaperone binding	IEA	16Dec
MF	GO:0060589	nucleoside-triphosphatase regulator activity	None	Extended
MF	GO:0060590	ATPase regulator activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predicted GO
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0004527	exonuclease activity	IEP	Predicted GO
BP	GO:0006260	DNA replication	IEP	Predicted GO
MF	GO:0008408	3'-5' exonuclease activity	IEP	Predicted GO
MF	GO:0008483	transaminase activity	IEP	Predicted GO
MF	GO:0008565	protein transporter activity	IEP	Predicted GO
CC	GO:0009523	photosystem II	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
MF	GO:0016730	oxidoreductase activity, acting on iron-sulfur proteins as donors	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predicted GO
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	Predicted GO
MF	GO:0016866	intramolecular transferase activity	IEP	Predicted GO
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Predicted GO
MF	GO:0019842	vitamin binding	IEP	Predicted GO
CC	GO:0019898	extrinsic component of membrane	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
MF	GO:0032977	membrane insertase activity	IEP	Predicted GO
BP	GO:0033013	tetrapyrrole metabolic process	IEP	Predicted GO
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	Predicted GO
MF	GO:0034061	DNA polymerase activity	IEP	Predicted GO
MF	GO:0050662	coenzyme binding	IEP	Predicted GO
MF	GO:0051082	unfolded protein binding	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000740	GrpE	104	266

External Links

No external refs found!

Sobic.006G082500.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation