1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G097300.1

Sobic.006G097300.1


Description : substrate adaptor *(SKIP18) of SCF E3 ubiquitin ligase complex & regulatory protein *(FBW2) of RNA-induced silencing complex (RISC) assembly


Gene families : OG_42_0000249 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000249_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G097300.1
Cluster HCAA Clusters: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Kfl00434_0100 kfl00434_0100_v1.1 (at5g23340 : 122.0) RNI-like superfamily protein;... 0.03 Orthogroups_2024-Update
Mp4g03420.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Solyc08g013790 No alias F-box/LRR protein (AHRD V3.3 *-* G7I6M1_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 155 195
No external refs found!