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  5. At3g60840

At3g60840


Description : 65-kDa microtubule-associated protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZY0]


Gene families : OG_42_0000245 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g60840
Cluster HCCA clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
A4A49_34351 No alias 65-kda microtubule-associated protein 3 0.03 Orthogroups_2024-Update
At5g62250 No alias 65-kDa microtubule-associated protein 9... 0.04 Orthogroups_2024-Update
Brara.A02806.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.K01451.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.09G268800 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.04 Orthogroups_2024-Update
Glyma.10G178100 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.04 Orthogroups_2024-Update
Glyma.14G018550 No alias microtubule-associated proteins 65-1 0.03 Orthogroups_2024-Update
Glyma.18G089901 No alias microtubule-associated protein 65-2 0.03 Orthogroups_2024-Update
Glyma.20G212100 No alias Microtubule associated protein (MAP65/ASE1) family protein 0.03 Orthogroups_2024-Update
Kfl00072_0120 kfl00072_0120_v1.1 (at2g01910 : 319.0) Binds microtubules. Induces a... 0.02 Orthogroups_2024-Update
LOC_Os03g50970 No alias retrotransposon protein, putative, Ty1-copia subclass, expressed 0.02 Orthogroups_2024-Update
MA_10426277g0020 No alias (at5g51600 : 280.0) Mutant has defective roots.... 0.04 Orthogroups_2024-Update
Pp1s153_98V6 No alias microtubule-associated protein map65-1a 0.03 Orthogroups_2024-Update
Solyc01g096680 No alias Microtubule associated family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc03g007130 No alias 65-kDa microtubule-associated 3-like protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g072280 No alias 65-kDa microtubule-associated-like protein (AHRD V3.3... 0.06 Orthogroups_2024-Update
Sopen03g003120 No alias Microtubule associated protein (MAP65/ASE1 family) 0.04 Orthogroups_2024-Update
Sopen05g010590 No alias Microtubule associated protein (MAP65/ASE1 family) 0.03 Orthogroups_2024-Update
Sopen11g029950 No alias Microtubule associated protein (MAP65/ASE1 family) 0.03 Orthogroups_2024-Update
evm.model.contig_3488.5 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
evm.model.tig00021318.70 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!