1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G112800.1

Sobic.006G112800.1


Description : Kinesin-14-type motor protein


Gene families : OG_42_0000091 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G112800.1
Cluster HCAA Clusters: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
A4A49_38170 No alias kinesin-4 0.03 Orthogroups_2024-Update
At1g18410 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
HORVU1Hr1G075820.5 No alias Unknown function 0.01 Orthogroups_2024-Update
LOC_Os01g14090 No alias kinesin motor domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436275g0010 No alias (at4g05190 : 746.0) ATK5 encodes a kinesin protein... 0.02 Orthogroups_2024-Update
Mp4g01680.1 No alias motor protein (Kinesin-14) 0.02 Orthogroups_2024-Update
PSME_00000432-RA No alias (at4g05190 : 740.0) ATK5 encodes a kinesin protein... 0.03 Orthogroups_2024-Update
PSME_00003322-RA No alias (at2g22610 : 775.0) Di-glucose binding protein with... 0.02 Orthogroups_2024-Update
PSME_00028241-RA No alias (at1g63640 : 196.0) P-loop nucleoside triphosphate... 0.02 Orthogroups_2024-Update
Potri.002G201000 No alias P-loop nucleoside triphosphate hydrolases superfamily... 0.04 Orthogroups_2024-Update
Seita.3G392100.1 No alias Kinesin-14-type motor protein 0.04 Orthogroups_2024-Update
Solyc06g069130 No alias Kinesin-like protein (AHRD V3.3 *** K4C886_SOLLC) 0.02 Orthogroups_2024-Update
Sopen04g008170 No alias Kinesin motor domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
BP GO:0007018 microtubule-based movement IEA 16Dec
MF GO:0008017 microtubule binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008649 rRNA methyltransferase activity IEP Predicted GO
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0031167 rRNA methylation IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP Predicted GO
BP GO:0070475 rRNA base methylation IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001752 Kinesin_motor_dom 385 701
IPR001715 CH-domain 44 143
No external refs found!