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  5. Sobic.006G115200.1

Sobic.006G115200.1


Description : transcriptional regulator *(MS188) & transcriptional regulator *(TDF1)


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G115200.1
Cluster HCAA Clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
A4A49_34066 No alias transcription factor rax3 0.05 Orthogroups_2024-Update
At3g12720 No alias AT3g12720/MBK21_8 [Source:UniProtKB/TrEMBL;Acc:Q9LTW2] 0.04 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.07 Orthogroups_2024-Update
GRMZM2G173633 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
GRMZM2G325907 No alias myb domain protein 103 0.03 Orthogroups_2024-Update
Glyma.02G247100 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
Glyma.03G250600 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Glyma.10G010300 No alias myb domain protein 78 0.03 Orthogroups_2024-Update
Glyma.10G236600 No alias myb domain protein 45 0.03 Orthogroups_2024-Update
Glyma.11G107100 No alias myb domain protein 4 0.05 Orthogroups_2024-Update
Glyma.19G024700 No alias myb domain protein 16 0.03 Orthogroups_2024-Update
HORVU1Hr1G008810.3 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
HORVU1Hr1G041280.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU1Hr1G074260.1 No alias MYB class-R2R3 subgroup-4 transcription factor & MYB... 0.03 Orthogroups_2024-Update
HORVU2Hr1G028470.5 No alias MYB class-R2R3 subgroup-1 transcription factor 0.08 Orthogroups_2024-Update
HORVU2Hr1G041300.2 No alias MYB class-R2R3 subgroup-11 transcription factor 0.03 Orthogroups_2024-Update
HORVU3Hr1G092820.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G018360.2 No alias MYB class-R2R3 subgroup-4 transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G081770.2 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G041810.5 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os09g36730 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g03150 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_137934g0010 No alias (at3g23250 : 215.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
MA_139924g0010 No alias (at4g38620 : 266.0) Encodes a R2R3 MYB protein which is... 0.04 Orthogroups_2024-Update
MA_15687g0010 No alias (at5g49620 : 209.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_2871g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_80033g0010 No alias (at5g65790 : 232.0) Encodes a putative MYB transcription... 0.03 Orthogroups_2024-Update
MA_8147g0020 No alias (at1g22640 : 206.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
MA_8206949g0010 No alias (q7xbh4|myb4_orysa : 213.0) Myb-related protein Myb4... 0.04 Orthogroups_2024-Update
MA_96853g0010 No alias (p93417|gam1_orysa : 259.0) Transcription factor GAMYB... 0.04 Orthogroups_2024-Update
PSME_00010958-RA No alias (at3g61250 : 283.0) Member of the R2R3 factor gene... 0.06 Orthogroups_2024-Update
PSME_00021444-RA No alias (at1g22640 : 170.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
PSME_00021445-RA No alias (at1g22640 : 169.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00039195-RA No alias (at5g57620 : 239.0) Encodes a putative transcription... 0.06 Orthogroups_2024-Update
PSME_00052727-RA No alias (p10290|mybc_maize : 194.0) Anthocyanin regulatory C1... 0.02 Orthogroups_2024-Update
PSME_00053156-RA No alias (at1g48000 : 177.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
Potri.010G149900 No alias myb domain protein 108 0.02 Orthogroups_2024-Update
Pp1s204_13V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s78_152V6 No alias myb-related transcription factor 0.02 Orthogroups_2024-Update
Seita.1G117000.1 No alias regulatory protein *(LAF1) of phytochrome signalling... 0.05 Orthogroups_2024-Update
Seita.1G324800.1 No alias MYB class-R2R3 subgroup-10/24 transcription factor 0.05 Orthogroups_2024-Update
Seita.2G199800.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.2G213200.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G062400.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.3G402900.1 No alias MYB class-R2R3 subgroup-14 transcription factor 0.04 Orthogroups_2024-Update
Seita.5G239400.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G286200.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.04 Orthogroups_2024-Update
Seita.7G167300.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.04 Orthogroups_2024-Update
Seita.9G222100.1 No alias MYB class-R2R3 subgroup-2 transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G404400.2 No alias transcriptional regulator *(TDF1) & MYB class-R2R3... 0.05 Orthogroups_2024-Update
Sobic.002G423300.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G191800.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.02 Orthogroups_2024-Update
Sobic.008G020300.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G106601.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Solyc05g051550 No alias MYB-related transcription factor (AHRD V3.3 *** A0A059PRU0_SALMI) 0.03 Orthogroups_2024-Update
Sopen01g001670 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g028000 No alias Myb-like DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen09g003070 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen11g005820 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 110
IPR001005 SANT/Myb 14 61
No external refs found!