1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G117400.1

Sobic.006G117400.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G117400.1
Cluster HCAA Clusters: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
76748 No alias beta glucosidase 40 0.02 Orthogroups_2024-Update
A4A49_02252 No alias cyanogenic beta-glucosidase 0.04 Orthogroups_2024-Update
A4A49_13128 No alias beta-glucosidase 12 0.03 Orthogroups_2024-Update
A4A49_36649 No alias beta-glucosidase 47 0.03 Orthogroups_2024-Update
A4A49_56430 No alias beta-glucosidase 18 0.03 Orthogroups_2024-Update
At1g02850 No alias Beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:B3H5Q1] 0.04 Orthogroups_2024-Update
At1g47600 No alias Myrosinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GRX1] 0.03 Orthogroups_2024-Update
At1g60270 No alias Putative beta-glucosidase 6... 0.03 Orthogroups_2024-Update
At2g44460 No alias Beta-glucosidase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3B3] 0.02 Orthogroups_2024-Update
Bradi1g42690 No alias beta glucosidase 12 0.03 Orthogroups_2024-Update
Bradi2g27770 No alias beta glucosidase 11 0.05 Orthogroups_2024-Update
Bradi3g39997 No alias beta glucosidase 17 0.03 Orthogroups_2024-Update
Bradi4g34927 No alias beta glucosidase 11 0.03 Orthogroups_2024-Update
Brara.C02374.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.D02693.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.D02695.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.F02147.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.G00669.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.I04145.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Brara.I04146.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G069024 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
GRMZM2G077015 No alias beta glucosidase 15 0.03 Orthogroups_2024-Update
GRMZM5G828987 No alias beta glucosidase 40 0.03 Orthogroups_2024-Update
Glyma.11G129900 No alias beta glucosidase 17 0.03 Orthogroups_2024-Update
Glyma.11G130100 No alias beta glucosidase 13 0.04 Orthogroups_2024-Update
Glyma.12G054000 No alias beta glucosidase 17 0.04 Orthogroups_2024-Update
Glyma.12G222800 No alias beta glucosidase 46 0.02 Orthogroups_2024-Update
Glyma.15G031300 No alias beta glucosidase 15 0.03 Orthogroups_2024-Update
Glyma.15G031400 No alias beta glucosidase 15 0.06 Orthogroups_2024-Update
HORVU0Hr1G020750.15 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
HORVU7Hr1G046250.2 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
LOC_Os01g59840 No alias Os1bglu3 - beta-glucosidase homologue, similar to G. max... 0.03 Orthogroups_2024-Update
LOC_Os03g49610 No alias Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high... 0.03 Orthogroups_2024-Update
LOC_Os04g39814 No alias Os4bglu9 - beta-glucosidase homologue, similar to... 0.03 Orthogroups_2024-Update
LOC_Os08g39860 No alias Os8bglu27 - beta-glucosidase homologue, similar to... 0.03 Orthogroups_2024-Update
LOC_Os08g39870 No alias Os8bglu28 - beta-glucosidase homologue, similar to... 0.03 Orthogroups_2024-Update
MA_10426205g0010 No alias (at2g44480 : 377.0) beta glucosidase 17 (BGLU17);... 0.05 Orthogroups_2024-Update
MA_48585g0010 No alias (at1g26560 : 521.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
MA_8849054g0010 No alias (at1g26560 : 496.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00008140-RA No alias (at2g44480 : 496.0) beta glucosidase 17 (BGLU17);... 0.04 Orthogroups_2024-Update
PSME_00008141-RA No alias (at1g26560 : 505.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00011583-RA No alias (at1g02850 : 485.0) beta glucosidase 11 (BGLU11);... 0.03 Orthogroups_2024-Update
PSME_00011815-RA No alias (at5g24550 : 399.0) beta glucosidase 32 (BGLU32);... 0.02 Orthogroups_2024-Update
PSME_00014991-RA No alias (at1g26560 : 744.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00019735-RA No alias (at1g26560 : 751.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00026032-RA No alias (at2g44480 : 490.0) beta glucosidase 17 (BGLU17);... 0.03 Orthogroups_2024-Update
PSME_00027980-RA No alias (at1g26560 : 409.0) beta glucosidase 40 (BGLU40);... 0.03 Orthogroups_2024-Update
PSME_00028513-RA No alias (at2g44480 : 476.0) beta glucosidase 17 (BGLU17);... 0.03 Orthogroups_2024-Update
PSME_00031537-RA No alias (at5g42260 : 511.0) beta glucosidase 12 (BGLU12);... 0.03 Orthogroups_2024-Update
PSME_00033604-RA No alias (at4g21760 : 110.0) beta-glucosidase 47 (BGLU47);... 0.02 Orthogroups_2024-Update
Potri.001G223900 No alias beta glucosidase 27 0.03 Orthogroups_2024-Update
Potri.001G225900 No alias beta glucosidase 16 0.02 Orthogroups_2024-Update
Potri.001G226000 No alias beta glucosidase 32 0.04 Orthogroups_2024-Update
Potri.001G227400 No alias beta glucosidase 17 0.03 Orthogroups_2024-Update
Potri.001G409900 No alias beta glucosidase 41 0.05 Orthogroups_2024-Update
Potri.004G019500 No alias beta glucosidase 46 0.05 Orthogroups_2024-Update
Potri.004G019700 No alias beta glucosidase 46 0.04 Orthogroups_2024-Update
Potri.008G094200 No alias beta glucosidase 40 0.03 Orthogroups_2024-Update
Pp1s76_8V6 No alias latex cyanogenic beta glucosidase 0.03 Orthogroups_2024-Update
Pp1s9_78V6 No alias ac074354_15 beta-glucosidase 0.02 Orthogroups_2024-Update
Seita.3G270000.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Sobic.003G100000.1 No alias beta-glucosidase involved in pollen intine formation &... 0.04 Orthogroups_2024-Update
Sobic.006G145800.1 No alias coniferin beta-glucosidase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sopen01g033610 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update
Sopen02g025000 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update
Sopen08g014090 No alias Glycosyl hydrolase family 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 55 527
No external refs found!