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  5. Sobic.006G120000.1

Sobic.006G120000.1


Description : Unknown function


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G120000.1
Cluster HCAA Clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_32094 No alias btbpoz domain-containing protein 0.02 Orthogroups_2024-Update
Bradi4g25900 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Bradi5g23307 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM2G025880 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
GRMZM5G812926 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G015480.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
HORVU7Hr1G097110.7 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os02g35970 No alias BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os11g02610 No alias BTBN20 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
LOC_Os11g02620 No alias BTBN21 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.02 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.04 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.02 Orthogroups_2024-Update
Potri.010G223600 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s454_11V6 No alias transposon protein mutator sub-class 0.03 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G145300.3 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070070 proton-transporting V-type ATPase complex assembly IEP Predicted GO
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP Predicted GO
BP GO:0070072 vacuolar proton-transporting V-type ATPase complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 199 484
No external refs found!