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  5. Sobic.006G128500.1

Sobic.006G128500.1


Description : florigen component *(FT)


Gene families : OG_42_0000178 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000178_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G128500.1
Cluster HCAA Clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
Bradi4g39760 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.03 Orthogroups_2024-Update
Brara.B00114.1 No alias effector protein *(TFL/BFT/CEN) 0.02 Orthogroups_2024-Update
GRMZM2G440005 No alias PEBP (phosphatidylethanolamine-binding protein) family protein 0.05 Orthogroups_2024-Update
LOC_Os06g30370 No alias osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 ... 0.03 Orthogroups_2024-Update
Seita.4G067600.1 No alias effector protein *(TFL/BFT/CEN) & florigen component *(FT) 0.02 Orthogroups_2024-Update
Sobic.009G199900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
evm.model.tig00021127.16 No alias (at1g18100 : 80.1) Encodes a member of the FT and TFL1... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Predicted GO
MF GO:0015020 glucuronosyltransferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR008914 PEBP 49 150
No external refs found!