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  5. Sobic.006G131800.1

Sobic.006G131800.1


Description : BBX class-IV transcription factor


Gene families : OG_42_0004508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G131800.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
At1g06040 No alias B-box zinc finger protein 24... 0.04 Orthogroups_2024-Update
Brara.H02976.1 No alias BBX class-IV transcription factor 0.07 Orthogroups_2024-Update
Brara.I05427.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
Brara.J00413.1 No alias BBX class-IV transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G018876 No alias B-box zinc finger family protein 0.05 Orthogroups_2024-Update
Glyma.11G127100 No alias B-box zinc finger family protein 0.06 Orthogroups_2024-Update
Glyma.12G051700 No alias B-box zinc finger family protein 0.06 Orthogroups_2024-Update
Potri.017G028300 No alias B-box zinc finger family protein 0.02 Orthogroups_2024-Update
Pp1s509_13V6 No alias zinc finger 0.04 Orthogroups_2024-Update
Seita.1G225000.1 No alias BBX class-IV transcription factor 0.03 Orthogroups_2024-Update
Seita.7G149800.1 No alias BBX class-IV transcription factor 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
MF GO:0004143 diacylglycerol kinase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000315 Znf_B-box 60 101
IPR000315 Znf_B-box 4 47
No external refs found!