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  5. Sobic.006G132500.1

Sobic.006G132500.1


Description : Unknown function


Gene families : OG_42_0000525 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000525_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G132500.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
426710 No alias Chitinase family protein 0.06 Orthogroups_2024-Update
426722 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
A4A49_35699 No alias endochitinase ep3 0.04 Orthogroups_2024-Update
At2g43570 No alias CHI [Source:UniProtKB/TrEMBL;Acc:A0A178W3M3] 0.03 Orthogroups_2024-Update
Bradi5g14430 No alias homolog of carrot EP3-3 chitinase 0.03 Orthogroups_2024-Update
Brara.C01775.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C02214.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00366.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00903.1 No alias Unknown function 0.05 Orthogroups_2024-Update
GRMZM2G129189 No alias homolog of carrot EP3-3 chitinase 0.04 Orthogroups_2024-Update
HORVU2Hr1G085280.3 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os02g39330 No alias CHIT1 - Chitinase family protein precursor, expressed 0.02 Orthogroups_2024-Update
MA_102538g0010 No alias (p29022|chia_maize : 115.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
MA_10427514g0010 No alias (p29022|chia_maize : 267.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
MA_10430424g0010 No alias (p29022|chia_maize : 207.0) Endochitinase A precursor... 0.04 Orthogroups_2024-Update
MA_10435326g0010 No alias (at3g54420 : 247.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
MA_170598g0010 No alias (at2g43590 : 172.0) Chitinase family protein; FUNCTIONS... 0.03 Orthogroups_2024-Update
MA_191308g0010 No alias (at3g54420 : 235.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
MA_36141g0010 No alias (at3g54420 : 245.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
MA_44734g0010 No alias (p29022|chia_maize : 203.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
Mp4g23630.1 No alias no description available(sp|q949h3|chi1_hevbr : 199.0) 0.02 Orthogroups_2024-Update
PSME_00018393-RA No alias (at3g54420 : 241.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00019563-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00026001-RA No alias (p29022|chia_maize : 260.0) Endochitinase A precursor... 0.02 Orthogroups_2024-Update
PSME_00029190-RA No alias (p29022|chia_maize : 256.0) Endochitinase A precursor... 0.06 Orthogroups_2024-Update
PSME_00029419-RA No alias (at3g54420 : 244.0) encodes an EP3 chitinase that is... 0.07 Orthogroups_2024-Update
PSME_00030534-RA No alias (at3g54420 : 238.0) encodes an EP3 chitinase that is... 0.02 Orthogroups_2024-Update
PSME_00030535-RA No alias (at3g54420 : 248.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00030955-RA No alias (at3g54420 : 243.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00036436-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00037478-RA No alias (at3g54420 : 236.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00037516-RA No alias (at3g54420 : 211.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00037636-RA No alias (p29022|chia_maize : 228.0) Endochitinase A precursor... 0.05 Orthogroups_2024-Update
PSME_00039570-RA No alias (p29023|chib_maize : 253.0) Endochitinase B precursor... 0.05 Orthogroups_2024-Update
PSME_00046774-RA No alias (at3g54420 : 162.0) encodes an EP3 chitinase that is... 0.07 Orthogroups_2024-Update
PSME_00047416-RA No alias (p29022|chia_maize : 241.0) Endochitinase A precursor... 0.03 Orthogroups_2024-Update
PSME_00050706-RA No alias (p29022|chia_maize : 237.0) Endochitinase A precursor... 0.07 Orthogroups_2024-Update
PSME_00050767-RA No alias (p29022|chia_maize : 240.0) Endochitinase A precursor... 0.06 Orthogroups_2024-Update
PSME_00051412-RA No alias (at3g54420 : 249.0) encodes an EP3 chitinase that is... 0.04 Orthogroups_2024-Update
PSME_00051432-RA No alias (at3g54420 : 213.0) encodes an EP3 chitinase that is... 0.07 Orthogroups_2024-Update
PSME_00052222-RA No alias (at3g54420 : 236.0) encodes an EP3 chitinase that is... 0.03 Orthogroups_2024-Update
PSME_00052568-RA No alias (p29022|chia_maize : 277.0) Endochitinase A precursor... 0.06 Orthogroups_2024-Update
Potri.013G125000 No alias homolog of carrot EP3-3 chitinase 0.04 Orthogroups_2024-Update
Seita.1G225300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G150500.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Seita.7G150600.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.7G150700.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Sobic.003G156000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.006G132200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G132400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen04g027980 No alias Chitinase class I 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA 16Dec
BP GO:0006032 chitin catabolic process IEA 16Dec
MF GO:0008061 chitin binding IEA 16Dec
BP GO:0016998 cell wall macromolecule catabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 232 279
IPR000726 Glyco_hydro_19_cat 83 225
IPR001002 Chitin-bd_1 27 60
No external refs found!