Sobic.006G135600.4

Description : S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase

Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G135600.4
Cluster	HCAA Clusters: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21239	No alias	s-adenosylmethionine decarboxylase proenzyme	0.04	Orthogroups_2024-Update
A4A49_31954	No alias	s-adenosylmethionine decarboxylase proenzyme	0.03	Orthogroups_2024-Update
Brara.A03903.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.02	Orthogroups_2024-Update
Brara.C02987.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.05	Orthogroups_2024-Update
Cre03.g205900	No alias	S-adenosylmethionine decarboxylase	0.02	Orthogroups_2024-Update
GRMZM2G125635	No alias	Adenosylmethionine decarboxylase family protein	0.06	Orthogroups_2024-Update
GRMZM2G154397	No alias	Adenosylmethionine decarboxylase family protein	0.06	Orthogroups_2024-Update
HORVU2Hr1G086140.5	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
HORVU6Hr1G056110.3	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
LOC_Os09g25625	No alias	S-adenosyl-l-methionine decarboxylase leader peptide,...	0.03	Orthogroups_2024-Update
Mp1g22070.1	No alias	ornithine decarboxylase. S-adenosyl methionine decarboxylase	0.02	Orthogroups_2024-Update
Potri.004G106800	No alias	S-adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update
Pp1s187_30V6	No alias	s-adenosylmethionine decarboxylase	0.04	Orthogroups_2024-Update
Pp1s335_22V6	No alias	s-adenosylmethionine decarboxylase	0.04	Orthogroups_2024-Update
Seita.7G154200.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
Solyc02g089610	No alias	S-adenosylmethionine decarboxylase 2	0.05	Orthogroups_2024-Update
Solyc05g010420	No alias	S-adenosylmethionine decarboxylase proenzyme (AHRD V3.3...	0.05	Orthogroups_2024-Update
Sopen01g005600	No alias	Adenosylmethionine decarboxylase	0.02	Orthogroups_2024-Update
Sopen02g034330	No alias	Adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update
Sopen05g006210	No alias	Adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	16Dec
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	16Dec
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	16Dec
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	cellular biogenic amine biosynthetic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	Predicted GO
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004332	fructose-bisphosphate aldolase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006749	glutathione metabolic process	IEP	Predicted GO
BP	GO:0006751	glutathione catabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016842	amidine-lyase activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
BP	GO:0030163	protein catabolic process	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	Predicted GO
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Predicted GO
BP	GO:0043171	peptide catabolic process	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
BP	GO:0044273	sulfur compound catabolic process	IEP	Predicted GO
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051187	cofactor catabolic process	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO
BP	GO:1901565	organonitrogen compound catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	75	401
IPR012511	AdoMetDC_leader	1	44

External Links

No external refs found!

Sobic.006G135600.4

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation