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  5. Sobic.006G147000.2

Sobic.006G147000.2


Description : component *(eL14) of large ribosomal-subunit (LSU) proteome


Gene families : OG_42_0002310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G147000.2
Cluster HCAA Clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
403602 No alias Ribosomal protein L14 0.11 Orthogroups_2024-Update
At2g20450 No alias 60S ribosomal protein L14-1... 0.13 Orthogroups_2024-Update
At4g27090 No alias AT4G27090 protein [Source:UniProtKB/TrEMBL;Acc:B9DHP0] 0.07 Orthogroups_2024-Update
Bradi1g06366 No alias Ribosomal protein L14 0.21 Orthogroups_2024-Update
Bradi5g15570 No alias Ribosomal protein L14 0.29 Orthogroups_2024-Update
Brara.A01683.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.38 Orthogroups_2024-Update
Brara.H01525.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.3 Orthogroups_2024-Update
Brara.K00108.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Cre17.g701200 No alias Ribosomal protein L14 0.06 Orthogroups_2024-Update
GRMZM2G140116 No alias Ribosomal protein L14 0.12 Orthogroups_2024-Update
GRMZM2G168330 No alias Ribosomal protein L14 0.18 Orthogroups_2024-Update
Glyma.02G004100 No alias Ribosomal protein L14 0.16 Orthogroups_2024-Update
Glyma.10G004300 No alias Ribosomal protein L14 0.15 Orthogroups_2024-Update
Glyma.10G182500 No alias Ribosomal protein L14 0.17 Orthogroups_2024-Update
Glyma.20G207500 No alias Ribosomal protein L14 0.07 Orthogroups_2024-Update
HORVU6Hr1G058560.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.18 Orthogroups_2024-Update
Kfl00487_0060 kfl00487_0060_v1.1 (p55844|rl14_pea : 178.0) Probable 60 ribosomal protein... 0.14 Orthogroups_2024-Update
LOC_Os02g40880 No alias ribosomal protein L14, putative, expressed 0.04 Orthogroups_2024-Update
MA_10434733g0010 No alias (at4g27090 : 182.0) Ribosomal protein L14; FUNCTIONS IN:... 0.12 Orthogroups_2024-Update
Mp8g17070.1 No alias component RPL14 of LSU proteome component 0.16 Orthogroups_2024-Update
PSME_00000258-RA No alias (at4g27090 : 212.0) Ribosomal protein L14; FUNCTIONS IN:... 0.17 Orthogroups_2024-Update
Potri.002G035700 No alias Ribosomal protein L14 0.11 Orthogroups_2024-Update
Potri.005G227300 No alias Ribosomal protein L14 0.15 Orthogroups_2024-Update
Pp1s101_10V6 No alias 60s ribosomal protein l14 0.1 Orthogroups_2024-Update
Pp1s334_38V6 No alias 60s ribosomal protein l14 0.33 Orthogroups_2024-Update
Pp1s83_247V6 No alias 60s ribosomal protein l14 0.39 Orthogroups_2024-Update
Seita.1G238800.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.35 Orthogroups_2024-Update
Seita.7G166100.1 No alias component *(eL14) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Solyc06g008260 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO) 0.14 Orthogroups_2024-Update
Solyc06g083820 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SS61_RICCO) 0.18 Orthogroups_2024-Update
Solyc09g066430 No alias 60S ribosomal protein L14, putative (AHRD V3.3 *** B9SV21_RICCO) 0.34 Orthogroups_2024-Update
Sopen06g003120 No alias Ribosomal protein L14 0.33 Orthogroups_2024-Update
Sopen06g035230 No alias Ribosomal protein L14 0.07 Orthogroups_2024-Update
Sopen09g028150 No alias Ribosomal protein L14 0.23 Orthogroups_2024-Update
evm.model.contig_3540.2 No alias (at4g27090 : 117.0) Ribosomal protein L14; FUNCTIONS IN:... 0.3 Orthogroups_2024-Update
evm.model.tig00000194.50 No alias (at4g27090 : 121.0) Ribosomal protein L14; FUNCTIONS IN:... 0.3 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA 16Dec
CC GO:0005840 ribosome IEA 16Dec
BP GO:0006412 translation IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030515 snoRNA binding IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR002784 Ribosomal_L14e_dom 45 117
No external refs found!