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  5. Sobic.006G147700.1

Sobic.006G147700.1


Description : threonine aldolase & EC_4.1 carbon-carbon lyase


Gene families : OG_42_0002557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002557_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G147700.1
Cluster HCAA Clusters: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G005160.5 No alias threonine aldolase & EC_4.1 carbon-carbon lyase 0.04 Orthogroups_2024-Update
LOC_Os04g43650 No alias L-allo-threonine aldolase, putative, expressed 0.02 Orthogroups_2024-Update
evm.model.tig00000769.45 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEA 16Dec
MF GO:0016829 lyase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001597 ArAA_b-elim_lyase/Thr_aldolase 7 294
No external refs found!