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  5. Sobic.006G149300.2

Sobic.006G149300.2


Description : cytokinin phosphoribohydrolase *(LOG)


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G149300.2
Cluster HCAA Clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
At4g35190 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
Bradi5g15840 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Brara.D02186.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.03 Orthogroups_2024-Update
Glyma.11G145100 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Glyma.13G140900 No alias lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G079570.6 No alias cytokinin phosphoribohydrolase *(LOG) 0.02 Orthogroups_2024-Update
LOC_Os05g46360 No alias possible lysine decarboxylase domain containing protein,... 0.04 Orthogroups_2024-Update
PSME_00040646-RA No alias (at2g28305 : 298.0) LONELY GUY 1 (LOG1); CONTAINS... 0.02 Orthogroups_2024-Update
Solyc01g005680 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update
Solyc04g081290 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
Solyc08g062820 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 80 210
No external refs found!