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  5. Sobic.006G152700.2

Sobic.006G152700.2


Description : iron chelator transporter *(YSL) & ferric cation-chelator transporter *(YSL)


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G152700.2
Cluster HCAA Clusters: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Bradi5g17220 No alias YELLOW STRIPE like 3 0.02 Orthogroups_2024-Update
Bradi5g17230 No alias YELLOW STRIPE like 2 0.02 Orthogroups_2024-Update
Brara.D01240.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
GRMZM2G156599 No alias YELLOW STRIPE like 3 0.03 Orthogroups_2024-Update
Glyma.20G004200 No alias YELLOW STRIPE like 7 0.04 Orthogroups_2024-Update
Potri.004G069300 No alias YELLOW STRIPE like 7 0.03 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.04 Orthogroups_2024-Update
Solyc03g082620 No alias Yellow stripe 1A transporter (AHRD V3.3 *** A0A0K9P9K5_ZOSMR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0009733 response to auxin IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 1 599
No external refs found!