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  5. Sobic.006G155700.1

Sobic.006G155700.1


Description : suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter


Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G155700.1
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
171321 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
234186 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
Bradi2g31910 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
GRMZM2G096952 No alias white-brown complex homolog protein 11 0.04 Orthogroups_2024-Update
GRMZM2G157564 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
GRMZM2G177314 No alias white-brown complex homolog protein 11 0.04 Orthogroups_2024-Update
GRMZM2G177812 No alias white-brown complex homolog protein 11 0.05 Orthogroups_2024-Update
Glyma.08G070800 No alias white-brown complex homolog protein 11 0.02 Orthogroups_2024-Update
Glyma.08G070900 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
HORVU6Hr1G027440.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os12g22110 No alias ABC-2 type transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_10436774g0010 No alias (at1g17840 : 879.0) Encodes a plasma membrane-localized... 0.02 Orthogroups_2024-Update
Potri.001G311300 No alias white-brown complex homolog protein 11 0.07 Orthogroups_2024-Update
Potri.001G312200 No alias white-brown complex homolog protein 11 0.06 Orthogroups_2024-Update
Potri.009G051200 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Seita.2G240500.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Seita.3G079600.1 No alias wax lipid exporter *(CER5) & subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Seita.7G176000.1 No alias suberin/cutin lipid exporter *(DSO) & subfamily ABCG transporter 0.06 Orthogroups_2024-Update
Solyc11g009100 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NWI5_ZOSMR) 0.04 Orthogroups_2024-Update
Sopen01g047920 No alias ABC-2 type transporter 0.05 Orthogroups_2024-Update
Sopen05g029960 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 466 672
IPR003439 ABC_transporter-like 153 304
No external refs found!