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  5. Sobic.006G157100.1

Sobic.006G157100.1


Description : delta-4 sphingolipid desaturase


Gene families : OG_42_0007763 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007763_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G157100.1
Cluster HCAA Clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
A4A49_29685 No alias sphingolipid delta(4)-desaturase des1-like protein 0.02 Orthogroups_2024-Update
Seita.7G177500.1 No alias delta-4 sphingolipid desaturase 0.05 Orthogroups_2024-Update
evm.model.tig00020723.7 No alias (at4g04930 : 166.0) Encodes a sphingolipid... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 71 295
IPR013866 Sphingolipid_d4-desaturase_N 13 48
No external refs found!