Sobic.006G162800.1

Description : transcription factor *(A/B-GATA)

Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G162800.1
Cluster	HCAA Clusters: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
405209	No alias	GATA transcription factor 20	0.03	Orthogroups_2024-Update
A4A49_16466	No alias	gata transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_19992	No alias	gata transcription factor 5	0.03	Orthogroups_2024-Update
AC202864.3_FG002	No alias	GATA transcription factor 12	0.04	Orthogroups_2024-Update
At4g36620	No alias	GATA transcription factor 19...	0.04	Orthogroups_2024-Update
Bradi2g35057	No alias	GATA transcription factor 23	0.02	Orthogroups_2024-Update
Bradi2g62660	No alias	GATA transcription factor 17	0.01	Orthogroups_2024-Update
Bradi3g33200	No alias	GATA transcription factor 4	0.04	Orthogroups_2024-Update
Brara.B03483.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
Brara.I03425.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
GRMZM2G101058	No alias	GATA transcription factor 4	0.02	Orthogroups_2024-Update
HORVU1Hr1G076000.1	No alias	transcription factor *(A/B-GATA)	0.02	Orthogroups_2024-Update
HORVU5Hr1G005990.5	No alias	transcription factor *(A/B-GATA)	0.03	Orthogroups_2024-Update
HORVU6Hr1G088370.6	No alias	transcription factor *(A/B-GATA)	0.05	Orthogroups_2024-Update
LOC_Os01g24070	No alias	GATA zinc finger domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_103421g0030	No alias	(at5g66320 : 154.0) Encodes GATA transcription factor...	0.04	Orthogroups_2024-Update
MA_10434815g0010	No alias	(at2g45050 : 142.0) Encodes a member of the GATA factor...	0.03	Orthogroups_2024-Update
MA_14038g0010	No alias	(at5g66320 : 119.0) Encodes GATA transcription factor...	0.03	Orthogroups_2024-Update
PSME_00007174-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00026073-RA	No alias	(at5g66320 : 163.0) Encodes GATA transcription factor...	0.03	Orthogroups_2024-Update
Pp1s241_14V6	No alias	hypothetical protein similar to Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
Pp1s32_226V6	No alias	hypothetical protein similar to Arabidopsis thaliana...	0.02	Orthogroups_2024-Update
Seita.1G358400.1	No alias	transcription factor *(A/B-GATA)	0.04	Orthogroups_2024-Update
Seita.7G183600.1	No alias	transcription factor *(A/B-GATA)	0.06	Orthogroups_2024-Update
Solyc01g090760	No alias	GATA transcription factor (AHRD V3.3 *** K4AZ17_SOLLC)	0.03	Orthogroups_2024-Update
Solyc04g015360	No alias	GATA transcription factor (AHRD V3.3 *** K4BQ39_SOLLC)	0.02	Orthogroups_2024-Update
evm.model.contig_3420.8	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	16Dec
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004143	diacylglycerol kinase activity	IEP	Predicted GO
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0007186	G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0007205	protein kinase C-activating G protein-coupled receptor signaling pathway	IEP	Predicted GO
BP	GO:0009690	cytokinin metabolic process	IEP	Predicted GO
BP	GO:0010817	regulation of hormone levels	IEP	Predicted GO
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	Predicted GO
BP	GO:0034754	cellular hormone metabolic process	IEP	Predicted GO
BP	GO:0042445	hormone metabolic process	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	371	405

External Links

No external refs found!

Sobic.006G162800.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation