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  5. Sobic.006G168200.1

Sobic.006G168200.1


Description : Unknown function


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G168200.1
Cluster HCAA Clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
A4A49_23010 No alias ethylene-responsive transcription factor 2 0.02 Orthogroups_2024-Update
At1g01250 No alias Ethylene-responsive transcription factor ERF023... 0.03 Orthogroups_2024-Update
At2g47520 No alias Ethylene-responsive transcription factor ERF071... 0.02 Orthogroups_2024-Update
At5g51990 No alias C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26] 0.02 Orthogroups_2024-Update
Bradi5g08380 No alias related to AP2 6l 0.01 Orthogroups_2024-Update
Bradi5g16450 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.C03562.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.G00808.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G084264 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G232000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G112000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.14G056200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G070410.3 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU2Hr1G037540.1 No alias transcription factor *(ERN1) & subgroup ERF-V... 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_100577g0010 No alias (at5g21960 : 112.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_10433094g0010 No alias (at1g74930 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_2446g0010 No alias (at2g20880 : 136.0) Integrase-type DNA-binding... 0.02 Orthogroups_2024-Update
MA_40338g0010 No alias (at1g21910 : 84.7) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_463250g0010 No alias (at5g11590 : 121.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_8574268g0010 No alias (at5g11590 : 123.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp7g13760.1 No alias transcription factor (DREB) 0.02 Orthogroups_2024-Update
PSME_00032194-RA No alias (at4g17500 : 100.0) Encodes a member of the ERF... 0.01 Orthogroups_2024-Update
PSME_00037532-RA No alias (at5g61890 : 129.0) encodes a member of the ERF... 0.03 Orthogroups_2024-Update
Potri.003G077700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G094500 No alias cytokinin response factor 5 0.02 Orthogroups_2024-Update
Potri.014G099900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Pp1s145_10V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s199_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s1_34V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s41_212V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G027200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G271000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G291500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.4G180800.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.6G235100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.8G046300.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Seita.8G098100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.001G481300.1 No alias subgroup ERF-VII transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G442100.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G100700.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Sobic.004G295700.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Solyc01g090560 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc11g011740 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g039250 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 75 124
No external refs found!