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  5. Sobic.006G169900.1

Sobic.006G169900.1


Description : subgroup ERF-III transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G169900.1
Cluster HCAA Clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
69413 No alias DREB and EAR motif protein 3 0.04 Orthogroups_2024-Update
At3g16280 No alias Integrase-type DNA-binding superfamily protein... 0.03 Orthogroups_2024-Update
Bradi4g35600 No alias C-repeat/DRE binding factor 1 0.03 Orthogroups_2024-Update
Brara.K01077.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G039112 No alias related to AP2 11 0.02 Orthogroups_2024-Update
GRMZM2G053503 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G099326 No alias ethylene response factor 7 0.04 Orthogroups_2024-Update
GRMZM2G156737 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.04G067200 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.05G157400 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Glyma.06G111300 No alias Integrase-type DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G244867 No alias ethylene-responsive element binding protein 0.05 Orthogroups_2024-Update
Glyma.09G041500 No alias ethylene-responsive element binding protein 0.04 Orthogroups_2024-Update
Glyma.11G036500 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Glyma.13G298600 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G169800 No alias DREB and EAR motif protein 3 0.05 Orthogroups_2024-Update
Glyma.18G252400 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Glyma.19G262700 No alias related to AP2 2 0.04 Orthogroups_2024-Update
LOC_Os04g32620 No alias ethylene-responsive transcription factor ERF114,... 0.03 Orthogroups_2024-Update
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Orthogroups_2024-Update
Potri.002G141200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G138800 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.018G085700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s13_457V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s145_10V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s276_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.2G112200.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G230500.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Seita.2G280400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.7G109400.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.9G268700.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Sobic.004G331300.2 No alias subgroup ERF-V transcription factor 0.05 Orthogroups_2024-Update
Sobic.007G188701.1 No alias subgroup ERF-X transcription factor 0.05 Orthogroups_2024-Update
Solyc05g052030 No alias ethylene response factor 4 0.03 Orthogroups_2024-Update
Solyc08g078180 No alias Ethylene Response Factor A.1 0.03 Orthogroups_2024-Update
Solyc12g005960 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.04 Orthogroups_2024-Update
Sopen06g018310 No alias AP2 domain 0.04 Orthogroups_2024-Update
Sopen12g024030 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 119 169
No external refs found!