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  5. Sobic.006G170600.1

Sobic.006G170600.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G170600.1
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G056908 No alias tonoplast intrinsic protein 2;3 0.02 Orthogroups_2024-Update
LOC_Os02g44080 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp6g11790.1 No alias tonoplast intrinsic protein (TIP) 0.02 Orthogroups_2024-Update
PSME_00033372-RA No alias (at2g36830 : 336.0) Encodes a tonoplast intrinsic... 0.01 Orthogroups_2024-Update
Potri.008G050700 No alias tonoplast intrinsic protein 1;3 0.02 Orthogroups_2024-Update
Potri.009G027200 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
Pp1s44_31V6 No alias mip tip subfamily 0.02 Orthogroups_2024-Update
Seita.1G259800.1 No alias tonoplast intrinsic protein *(TIP) 0.05 Orthogroups_2024-Update
Seita.7G175600.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 14 231
No external refs found!