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Description : RING-H2-class ATL-subclass E3 ubiquitin ligase
Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor: Sobic.006G184500.1 | |
| Cluster | HCAA Clusters: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_09089 | No alias | ring-h2 finger protein atl57 | 0.04 | Orthogroups_2024-Update | |
| A4A49_19370 | No alias | ring-h2 finger protein atl70 | 0.07 | Orthogroups_2024-Update | |
| A4A49_36505 | No alias | e3 ubiquitin-protein ligase atl6 | 0.02 | Orthogroups_2024-Update | |
| A4A49_40392 | No alias | ring-h2 finger protein atl58 | 0.03 | Orthogroups_2024-Update | |
| At2g17450 | No alias | Probable E3 ubiquitin-protein ligase ATL44... | 0.06 | Orthogroups_2024-Update | |
| Bradi2g26403 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Brara.B02267.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.F02864.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Brara.G00267.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Brara.G03117.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G050774 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G301585 | No alias | TOXICOS EN LEVADURA 2 | 0.02 | Orthogroups_2024-Update | |
| Glyma.01G017300 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.17G068200 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Glyma.19G236800 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| HORVU0Hr1G003000.2 | No alias | Unknown function | 0.07 | Orthogroups_2024-Update | |
| HORVU4Hr1G004390.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G107430.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| LOC_Os04g50100 | No alias | RING-H2 finger protein ATL5G, putative, expressed | 0.02 | Orthogroups_2024-Update | |
| MA_10106144g0010 | No alias | (at3g16720 : 110.0) RING-H2 protein induced after... | 0.03 | Orthogroups_2024-Update | |
| MA_129306g0010 | No alias | (at5g42200 : 80.1) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_19072g0010 | No alias | (at5g17600 : 137.0) RING/U-box superfamily protein;... | 0.03 | Orthogroups_2024-Update | |
| MA_38494g0010 | No alias | (at1g49230 : 119.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| MA_44828g0020 | No alias | (at3g62690 : 89.0) Encodes a RING-H2 zinc finger protein... | 0.02 | Orthogroups_2024-Update | |
| MA_5319g0010 | No alias | (at1g49230 : 120.0) RING/U-box superfamily protein;... | 0.02 | Orthogroups_2024-Update | |
| PSME_00054668-RA | No alias | (at5g01880 : 101.0) RING/U-box superfamily protein;... | 0.04 | Orthogroups_2024-Update | |
| Potri.009G110000 | No alias | RING/U-box superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Pp1s133_51V6 | No alias | ring finger | 0.03 | Orthogroups_2024-Update | |
| Pp1s257_3V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.03 | Orthogroups_2024-Update | |
| Pp1s71_157V6 | No alias | ac009177_16 ring-h2 zinc finger protein atl6 | 0.03 | Orthogroups_2024-Update | |
| Seita.2G087800.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G187800.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.05 | Orthogroups_2024-Update | |
| Sobic.004G279000.1 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase | 0.06 | Orthogroups_2024-Update | |
| Solyc11g010330 | No alias | RING/U-box superfamily protein, putative (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g066510 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT2G27940.1) | 0.03 | Orthogroups_2024-Update | |
| Sopen03g031440 | No alias | Ring finger domain | 0.04 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Predicted GO |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
| BP | GO:0005984 | disaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0005991 | trehalose metabolic process | IEP | Predicted GO |
| BP | GO:0005992 | trehalose biosynthetic process | IEP | Predicted GO |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0006006 | glucose metabolic process | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | Predicted GO |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| BP | GO:0019318 | hexose metabolic process | IEP | Predicted GO |
| BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
| BP | GO:0046351 | disaccharide biosynthetic process | IEP | Predicted GO |
| MF | GO:0050661 | NADP binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 87 | 130 |
| No external refs found! |