1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G187900.1

Sobic.006G187900.1


Description : EC_4.4 carbon-sulfur lyase & 1-aminocyclopropane-1-carboxylate (ACC) synthase


Gene families : OG_42_0000419 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G187900.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_01413 No alias 1-aminocyclopropane-1-carboxylate synthase 3 0.03 Orthogroups_2024-Update
A4A49_18413 No alias 1-aminocyclopropane-1-carboxylate synthase 0.03 Orthogroups_2024-Update
A4A49_57945 No alias 1-aminocyclopropane-1-carboxylate synthase 0.04 Orthogroups_2024-Update
At4g08040 No alias 1-aminocyclopropane-1-carboxylate synthase 11... 0.04 Orthogroups_2024-Update
Brara.A00119.1 No alias EC_4.4 carbon-sulfur lyase &... 0.04 Orthogroups_2024-Update
Brara.H01734.1 No alias EC_4.4 carbon-sulfur lyase &... 0.04 Orthogroups_2024-Update
Brara.I01418.1 No alias EC_4.4 carbon-sulfur lyase 0.02 Orthogroups_2024-Update
Brara.J00045.1 No alias EC_4.4 carbon-sulfur lyase &... 0.02 Orthogroups_2024-Update
GRMZM2G164405 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.07 Orthogroups_2024-Update
GRMZM5G894619 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.08 Orthogroups_2024-Update
Glyma.05G108900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.03 Orthogroups_2024-Update
Glyma.06G049900 No alias 1-amino-cyclopropane-1-carboxylate synthase 8 0.04 Orthogroups_2024-Update
Glyma.16G032200 No alias ACC synthase 1 0.04 Orthogroups_2024-Update
LOC_Os01g09700 No alias aminotransferase, classes I and II, domain containing... 0.03 Orthogroups_2024-Update
Mp6g04560.1 No alias Enzyme classification.EC_4 lyases.EC_4.4 carbon-sulfur... 0.02 Orthogroups_2024-Update
PSME_00017638-RA No alias (at4g26200 : 558.0) Member of a family of proteins in... 0.06 Orthogroups_2024-Update
PSME_00017640-RA No alias (at4g26200 : 550.0) Member of a family of proteins in... 0.02 Orthogroups_2024-Update
PSME_00021490-RA No alias (at4g26200 : 563.0) Member of a family of proteins in... 0.05 Orthogroups_2024-Update
PSME_00030828-RA No alias (at4g26200 : 544.0) Member of a family of proteins in... 0.03 Orthogroups_2024-Update
Potri.001G099400 No alias 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6 0.06 Orthogroups_2024-Update
Potri.002G163700 No alias ACC synthase 1 0.04 Orthogroups_2024-Update
Potri.003G117700 No alias ACC synthase 10 0.03 Orthogroups_2024-Update
Seita.9G109200.1 No alias EC_4.4 carbon-sulfur lyase &... 0.03 Orthogroups_2024-Update
Solyc04g077410 No alias 1-aminocyclopropane-1-carboxylate synthase 5 0.02 Orthogroups_2024-Update
Solyc07g026900 No alias 1-aminocyclopropane-1-carboxylate synthase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen02g036570 No alias Aminotransferase class I and II 0.04 Orthogroups_2024-Update
evm.model.contig_533.6 No alias (p23599|1a11_cucma : 166.0)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA 16Dec
MF GO:0030170 pyridoxal phosphate binding IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 49 430
No external refs found!