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  5. Sobic.006G191900.1

Sobic.006G191900.1


Description : Unknown function


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G191900.1
Cluster HCAA Clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
A4A49_08213 No alias ultraviolet-b receptor uvr8 0.03 Orthogroups_2024-Update
Potri.017G139600 No alias Regulator of chromosome condensation (RCC1) family with... 0.03 Orthogroups_2024-Update
Sopen12g034380 No alias Regulator of chromosome condensation (RCC1) repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 414 463
IPR000408 Reg_chr_condens 580 629
IPR000408 Reg_chr_condens 479 525
IPR013591 Brevis_radix_dom 997 1049
IPR001849 PH_domain 15 123
IPR000306 Znf_FYVE 637 698
No external refs found!