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  5. Sobic.006G211100.1

Sobic.006G211100.1


Description : Unknown function


Gene families : OG_42_0005036 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G211100.1
Cluster HCAA Clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At4g19610 No alias Nucleotide/nucleic acid binding protein... 0.03 Orthogroups_2024-Update
Bradi5g21380 No alias nucleotide binding;nucleic acid binding;RNA binding 0.03 Orthogroups_2024-Update
Pp1s42_20V6 No alias F24J7.162; RNA recognition motif (RRM)-containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009092 homoserine metabolic process IEP Predicted GO
BP GO:0019346 transsulfuration IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0050667 homocysteine metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 348 418
IPR000504 RRM_dom 5 73
IPR000504 RRM_dom 761 828
IPR000504 RRM_dom 541 601
IPR000504 RRM_dom 661 735
No external refs found!