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  5. Sobic.006G212200.1

Sobic.006G212200.1


Description : metal cation transporter *(ZIP)


Gene families : OG_42_0000242 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G212200.1
Cluster HCAA Clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
230231 No alias zinc transporter 4 precursor 0.02 Orthogroups_2024-Update
At1g10970 No alias Zinc transporter 4, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.A01065.1 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.02 Orthogroups_2024-Update
HORVU4Hr1G003050.4 No alias iron/zinc/manganese/cobalt cation transporter *(IRT) &... 0.02 Orthogroups_2024-Update
Seita.9G146200.1 No alias metal cation transporter *(ZIP) &... 0.02 Orthogroups_2024-Update
Sobic.007G064900.1 No alias metal cation transporter *(ZIP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
BP GO:0030001 metal ion transport IEA 16Dec
MF GO:0046873 metal ion transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003689 ZIP 44 364
No external refs found!