At3g61830


Description : Auxin response factor 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5W9]


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g61830
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
At1g19220 No alias Auxin response factor 19 [Source:UniProtKB/Swiss-Prot;Acc:Q8RYC8] 0.03 Orthogroups_2024-Update
Bradi1g33160 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
Brara.E00126.1 No alias ARF-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G056120 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
LOC_Os05g48870 No alias auxin response factor 15, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g07070.1 No alias transcription factor (ARF) 0.02 Orthogroups_2024-Update
Seita.7G169600.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc08g082630 No alias Auxin Response Factor 9A 0.04 Orthogroups_2024-Update
Sopen02g011920 No alias Auxin response factor 0.04 Orthogroups_2024-Update
Sopen06g031560 No alias Auxin response factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 228
IPR033389 AUX/IAA_dom 481 574
IPR010525 Auxin_resp 254 333
No external refs found!