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  5. Sobic.006G226100.2

Sobic.006G226100.2


Description : H-type thioredoxin *(Trx-H)


Gene families : OG_42_0002486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002486_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G226100.2
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
444114 No alias C-terminal cysteine residue is changed to a serine 1 0.01 Orthogroups_2024-Update
PSME_00046267-RA No alias (at1g11530 : 107.0) Encodes a monocysteinic thioredoxin,... 0.01 Orthogroups_2024-Update
PSME_00055053-RA No alias (at1g11530 : 129.0) Encodes a monocysteinic thioredoxin,... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 25 115
No external refs found!