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  5. Sobic.006G227900.2

Sobic.006G227900.2


Description : organic cation transporter *(OCT)


Gene families : OG_42_0002359 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G227900.2
Cluster HCAA Clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
Brara.G03283.1 No alias organic cation transporter *(OCT) 0.02 Orthogroups_2024-Update
Glyma.09G166400 No alias organic cation/carnitine transporter1 0.03 Orthogroups_2024-Update
HORVU2Hr1G108370.6 No alias organic cation transporter *(OCT) 0.04 Orthogroups_2024-Update
LOC_Os04g53930 No alias organic cation transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436973g0010 No alias (at1g73220 : 272.0) organic cation/carnitine... 0.04 Orthogroups_2024-Update
Mp8g15970.1 No alias organic cation transporter (OCT) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA 16Dec
MF GO:0022857 transmembrane transporter activity IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 117 513
No external refs found!