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  5. Sobic.006G231400.1

Sobic.006G231400.1


Description : Unknown function


Gene families : OG_42_0009561 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009561_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G231400.1
Cluster HCAA Clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Bradi5g23200 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 566 589
IPR002885 Pentatricopeptide_repeat 280 309
IPR002885 Pentatricopeptide_repeat 318 347
IPR002885 Pentatricopeptide_repeat 490 537
IPR002885 Pentatricopeptide_repeat 350 398
IPR002885 Pentatricopeptide_repeat 208 255
IPR002885 Pentatricopeptide_repeat 420 468
No external refs found!