1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G257900.1

Sobic.006G257900.1


Description : E2 MUB ubiquitin-conjugating enzyme


Gene families : OG_42_0000236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G257900.1
Cluster HCAA Clusters: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Bradi1g23630 No alias Ubiquitin-conjugating enzyme family protein 0.01 Orthogroups_2024-Update
Bradi2g53430 No alias ubiquitin-conjugating enzyme 11 0.04 Orthogroups_2024-Update
Brara.C01271.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
Brara.G00309.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update
GRMZM2G156517 No alias ubiquitin-conjugating enzyme 28 0.03 Orthogroups_2024-Update
GRMZM5G814314 No alias ubiquitin conjugating enzyme 9 0.02 Orthogroups_2024-Update
Glyma.12G032800 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Kfl00630_0080 kfl00630_0080_v1.1 (at3g13550 : 214.0) Encodes a protein similar to... 0.03 Orthogroups_2024-Update
LOC_Os02g02830 No alias ubiquitin-conjugating enzyme, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G471200 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Potri.011G168200 No alias ubiquitin conjugating enzyme 8 0.02 Orthogroups_2024-Update
Potri.012G033000 No alias ubiquitin-conjugating enzyme 10 0.03 Orthogroups_2024-Update
Pp1s319_37V6 No alias ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update
Pp1s69_31V6 No alias ubiquitin conjugating enzyme 0.02 Orthogroups_2024-Update
Seita.3G203000.1 No alias E2 MUB ubiquitin-conjugating enzyme 0.06 Orthogroups_2024-Update
Solyc05g050230 No alias Ubiquitin conjugating enzyme E2 (AHRD V3.3 *** A5YVL3_ADICA) 0.03 Orthogroups_2024-Update
Sopen05g028680 No alias Ubiquitin-conjugating enzyme 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
BP GO:0006359 regulation of transcription by RNA polymerase III IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0009922 fatty acid elongase activity IEP Predicted GO
BP GO:0016480 negative regulation of transcription by RNA polymerase III IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
BP GO:0017006 protein-tetrapyrrole linkage IEP Predicted GO
BP GO:0017007 protein-bilin linkage IEP Predicted GO
BP GO:0017009 protein-phycocyanobilin linkage IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predicted GO
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0046039 GTP metabolic process IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0051189 prosthetic group metabolic process IEP Predicted GO
BP GO:0051253 negative regulation of RNA metabolic process IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Predicted GO
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!