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  5. Sobic.006G260300.1

Sobic.006G260300.1


Description : C1-class subclass RD21/XCP thiol protease & EC_3.4 hydrolase acting on peptide bond (peptidase)


Gene families : OG_42_0000382 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G260300.1
Cluster HCAA Clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Glyma.05G096800 No alias Granulin repeat cysteine protease family protein 0.04 Orthogroups_2024-Update
MA_96038g0020 No alias (at1g47128 : 519.0) cysteine proteinase precursor-like... 0.06 Orthogroups_2024-Update
Seita.3G032700.1 No alias C1-class subclass RD21/XCP thiol protease & EC_3.4... 0.03 Orthogroups_2024-Update
Sopen04g032140 No alias Papain family cysteine protease 0.03 Orthogroups_2024-Update
Sopen12g030570 No alias Papain family cysteine protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA 16Dec
MF GO:0008234 cysteine-type peptidase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEP Predicted GO
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 57 115
IPR000668 Peptidase_C1A_C 145 361
IPR000118 Granulin 398 444
No external refs found!