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  5. Sobic.006G261500.1

Sobic.006G261500.1


Description : peroxisomal polyamine oxidase *(PAO2/3/4)


Gene families : OG_42_0001389 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001389_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G261500.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
At2g43020 No alias Probable polyamine oxidase 2... 0.03 Orthogroups_2024-Update
Brara.D02604.1 No alias peroxisomal polyamine oxidase *(PAO2/3/4) 0.03 Orthogroups_2024-Update
GRMZM2G150248 No alias polyamine oxidase 4 0.03 Orthogroups_2024-Update
HORVU2Hr1G121050.1 No alias peroxisomal polyamine oxidase *(PAO2/3/4) 0.02 Orthogroups_2024-Update
HORVU2Hr1G121060.1 No alias peroxisomal polyamine oxidase *(PAO2/3/4) 0.05 Orthogroups_2024-Update
LOC_Os04g57560 No alias amine oxidase, flavin-containing, domain containing... 0.03 Orthogroups_2024-Update
PSME_00007717-RA No alias (at2g43020 : 661.0) polyamine oxidase 2 (PAO2);... 0.03 Orthogroups_2024-Update
Potri.004G075800 No alias polyamine oxidase 4 0.02 Orthogroups_2024-Update
Potri.005G207300 No alias polyamine oxidase 2 0.04 Orthogroups_2024-Update
Seita.3G020600.1 No alias peroxisomal polyamine oxidase *(PAO2/3/4) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP Predicted GO
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
BP GO:0006401 RNA catabolic process IEP Predicted GO
BP GO:0006402 mRNA catabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0030688 preribosome, small subunit precursor IEP Predicted GO
BP GO:0043085 positive regulation of catalytic activity IEP Predicted GO
BP GO:0044093 positive regulation of molecular function IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 33 452
No external refs found!