Description : Unknown function
Gene families : OG_42_0003403 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Sorghum bicolor: Sobic.006G265200.1 | |
Cluster | HCAA Clusters: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
152901 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
Bradi5g26017 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.05 | Orthogroups_2024-Update | |
Cre01.g044850 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G084819 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.20G003400 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.04 | Orthogroups_2024-Update | |
Kfl00074_0170 | kfl00074_0170_v1.1 | (at5g23110 : 742.0) Zinc finger, C3HC4 type (RING... | 0.06 | Orthogroups_2024-Update | |
MA_10436421g0010 | No alias | (at5g23110 : 1516.0) Zinc finger, C3HC4 type (RING... | 0.04 | Orthogroups_2024-Update | |
Pp1s78_164V6 | No alias | protein binding | 0.05 | Orthogroups_2024-Update | |
Seita.3G017200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Solyc02g014190 | No alias | Protein binding protein, putative (AHRD V3.3 *** B9SMC2_RICCO) | 0.06 | Orthogroups_2024-Update | |
Sopen02g003520 | No alias | Zinc finger, C3HC4 type (RING finger) | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000148 | 1,3-beta-D-glucan synthase complex | IEP | Predicted GO |
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Predicted GO |
BP | GO:0000271 | polysaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003729 | mRNA binding | IEP | Predicted GO |
MF | GO:0003843 | 1,3-beta-D-glucan synthase activity | IEP | Predicted GO |
MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
MF | GO:0004518 | nuclease activity | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Predicted GO |
MF | GO:0005484 | SNAP receptor activity | IEP | Predicted GO |
MF | GO:0005488 | binding | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
CC | GO:0005685 | U1 snRNP | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
BP | GO:0006074 | (1->3)-beta-D-glucan metabolic process | IEP | Predicted GO |
BP | GO:0006075 | (1->3)-beta-D-glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006338 | chromatin remodeling | IEP | Predicted GO |
BP | GO:0006376 | mRNA splice site selection | IEP | Predicted GO |
BP | GO:0006401 | RNA catabolic process | IEP | Predicted GO |
BP | GO:0006402 | mRNA catabolic process | IEP | Predicted GO |
BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER | IEP | Predicted GO |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Predicted GO |
MF | GO:0008270 | zinc ion binding | IEP | Predicted GO |
BP | GO:0009250 | glucan biosynthetic process | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
MF | GO:0016407 | acetyltransferase activity | IEP | Predicted GO |
MF | GO:0016410 | N-acyltransferase activity | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016571 | histone methylation | IEP | Predicted GO |
BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | Predicted GO |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0019627 | urea metabolic process | IEP | Predicted GO |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Predicted GO |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Predicted GO |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Predicted GO |
BP | GO:0033692 | cellular polysaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | Predicted GO |
BP | GO:0034968 | histone lysine methylation | IEP | Predicted GO |
MF | GO:0035251 | UDP-glucosyltransferase activity | IEP | Predicted GO |
CC | GO:0035550 | urease complex | IEP | Predicted GO |
BP | GO:0043419 | urea catabolic process | IEP | Predicted GO |
BP | GO:0043543 | protein acylation | IEP | Predicted GO |
BP | GO:0043605 | cellular amide catabolic process | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
CC | GO:0044459 | plasma membrane part | IEP | Predicted GO |
CC | GO:0044464 | cell part | IEP | Predicted GO |
MF | GO:0044877 | protein-containing complex binding | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
MF | GO:0046914 | transition metal ion binding | IEP | Predicted GO |
BP | GO:0051273 | beta-glucan metabolic process | IEP | Predicted GO |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | Predicted GO |
MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Predicted GO |
CC | GO:0098797 | plasma membrane protein complex | IEP | Predicted GO |
CC | GO:0120114 | Sm-like protein family complex | IEP | Predicted GO |
CC | GO:1902494 | catalytic complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
No InterPro domains available for this sequence
No external refs found! |