1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G265900.1

Sobic.006G265900.1


Description : X-type thioredoxin *(Trx-X)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G265900.1
Cluster HCAA Clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
Bradi4g40800 No alias thioredoxin M-type 4 0.04 Orthogroups_2024-Update
HORVU2Hr1G075240.5 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
HORVU5Hr1G033050.1 No alias thioredoxin *(TRX-M) 0.04 Orthogroups_2024-Update
HORVU5Hr1G033060.1 No alias thioredoxin *(TRX-M) 0.04 Orthogroups_2024-Update
LOC_Os04g44830 No alias thioredoxin, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os04g57930 No alias thioredoxin, putative, expressed 0.03 Orthogroups_2024-Update
MA_474303g0010 No alias (p07591|trxm_spiol : 182.0) Thioredoxin M-type,... 0.03 Orthogroups_2024-Update
Mp4g18950.1 No alias M-type thioredoxin 0.03 Orthogroups_2024-Update
Pp1s106_67V6 No alias thioredoxin m - 0.01 Orthogroups_2024-Update
Pp1s23_109V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Pp1s317_49V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Seita.3G016700.1 No alias X-type thioredoxin *(Trx-X) 0.05 Orthogroups_2024-Update
evm.model.contig_2075.4 No alias (p23400|trxm_chlre : 102.0) Thioredoxin M-type,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 71 167
No external refs found!