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  5. Sobic.006G267800.1

Sobic.006G267800.1


Description : Unknown function


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G267800.1
Cluster HCAA Clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G151300 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G017640.4 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G015000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G202600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc11g005710 No alias Transducin/WD-like repeat-protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005956 protein kinase CK2 complex IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0019207 kinase regulator activity IEP Predicted GO
MF GO:0019887 protein kinase regulator activity IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 468 505
IPR001680 WD40_repeat 310 343
IPR001680 WD40_repeat 603 639
IPR001680 WD40_repeat 427 463
No external refs found!