Sobic.006G267900.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G267900.1
Cluster	HCAA Clusters: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
Brara.G02891.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Glyma.04G168300	No alias	cycling DOF factor 3	0.02	Orthogroups_2024-Update
Glyma.12G072400	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
HORVU4Hr1G013890.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.02	Orthogroups_2024-Update
Potri.002G129600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.007G058200	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Pp1s68_214V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Seita.3G327800.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sopen06g022000	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006952	defense response	IEP	Predicted GO
MF	GO:0015276	ligand-gated ion channel activity	IEP	Predicted GO
MF	GO:0022834	ligand-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	53	107

External Links

No external refs found!