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At3g62390


Description : Protein trichome birefringence-like 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZQ1]


Gene families : OG_42_0000293 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At3g62390
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G171200 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Glyma.09G109600 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Glyma.13G207300 No alias TRICHOME BIREFRINGENCE-LIKE 11 0.04 Orthogroups_2024-Update
Glyma.19G216500 No alias TRICHOME BIREFRINGENCE-LIKE 6 0.03 Orthogroups_2024-Update
Sopen01g031190 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 136 189
IPR026057 PC-Esterase 191 468
No external refs found!