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  5. Sobic.006G275300.1

Sobic.006G275300.1


Description : Unknown function


Gene families : OG_42_0000640 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000640_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.006G275300.1
Cluster HCAA Clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
At1g68450 No alias VQ motif-containing protein 8, chloroplastic... 0.02 Orthogroups_2024-Update
At3g18360 No alias VQ motif-containing protein 20... 0.02 Orthogroups_2024-Update
At3g18690 No alias Protein MKS1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGD5] 0.02 Orthogroups_2024-Update
GRMZM2G069169 No alias MAP kinase substrate 1 0.03 Orthogroups_2024-Update
Glyma.03G204900 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
MA_63411g0010 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
Potri.010G123700 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Pp1s23_240V6 No alias MYF24.8; VQ motif-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s310_23V6 No alias MVE11.5; VQ motif-containing protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s4_213V6 No alias MYF24.8; VQ motif-containing protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Sobic.006G075500.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 65 90
No external refs found!