Sobic.006G281900.3

Description : NAC-type transcription factor

Gene families : OG_42_0000017 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor: Sobic.006G281900.3
Cluster	HCAA Clusters: Cluster_142

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g63630	No alias	Arabidopsis NAC domain containing protein 87	0.02	Orthogroups_2024-Update
Brara.B01408.1	No alias	NAC-type transcription factor	0.02	Orthogroups_2024-Update
Brara.C03560.1	No alias	NAC-type transcription factor	0.04	Orthogroups_2024-Update
Brara.E01767.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.E03531.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
Brara.F03613.1	No alias	NAC-type transcription factor	0.05	Orthogroups_2024-Update
Brara.H02663.1	No alias	NAC-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G069047	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Orthogroups_2024-Update
PSME_00030678-RA	No alias	(at1g65910 : 262.0) NAC domain containing protein 28...	0.02	Orthogroups_2024-Update
PSME_00049694-RA	No alias	(at2g18060 : 259.0) Encodes a NAC-domain transcription...	0.03	Orthogroups_2024-Update
Potri.003G113000	No alias	NAC 007	0.05	Orthogroups_2024-Update
Pp1s279_85V6	No alias	no apical meristem	0.06	Orthogroups_2024-Update
Pp1s73_182V6	No alias	nac domain ipr003441	0.03	Orthogroups_2024-Update
Sopen08g001990	No alias	No apical meristem (NAM) protein	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	Predicted GO
BP	GO:0016072	rRNA metabolic process	IEP	Predicted GO
BP	GO:0034470	ncRNA processing	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	7	133

External Links

No external refs found!