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  5. Sobic.007G001300.1

Sobic.007G001300.1


Description : lignin polymerization scaffold protein *(CASP)


Gene families : OG_42_0000213 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor: Sobic.007G001300.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
A4A49_22807 No alias casparian strip membrane protein 2 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0006282 regulation of DNA repair IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
CC GO:0070939 Dsl1/NZR complex IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR006702 CASP_dom 70 219
No external refs found!